So I found out today that VFTuner actually does support the 2016+ 200 series. I scanned my 2018 LX and got an ECU ID of 360T1100 and they have the corresponding file in VFTuner. The file does show 8 speeds in the transmission shifting schedule tables.
So any competent shop should be able to tune these with a supercharger.
Additionally, the tables in the tune appear to be pretty much identical to what is in the Tundra tunes, like down to the 2nd decimal place, even going back to the earlier second gens. That means the TRD Supercharged tune parameters could be copied into the new tune I believe. I have the TRD Supercharger tune on HPTuners and VFTuner, and I do know that they have tweaked some parameters to make the engine more efficient with the blower(Cam timing, torque to air load calculations, etc).
That said, the Harrop Supercharger is a TVS2650, whereas the TRD Supercharger was a TVS1900, so I believe the TRD tune would be like 95% good but could be fine tuned for the higher capacity 2650.
Anyways, its all there. Someone just needs to get a tune together.