I have pretty close to the same issue. When cruising along any amount of lift on throttle input gives me a strong growl for a few seconds and then again for about a second after going back on the throttle.
My rear pinion was toast for about a year and chalked it up to that. I have Landtank lower arms, adjustable uppers (set to stock length) Pinion angle is good.
Finally got around to dealing with rebuilding the 3rd due to the wobbly pinion. I splurged and sent the diffs to ZUK for re-gear. He sent me pics of the pinion bearing and it was ate up pretty bad. When I plugged the rebuilt diffs back in the growl remained, but there was a slight improvement. I was very surprised because the amount of play in the rear pinion was ridiculous and I expected tremendous improvement.
Back to troubleshooting... Ujoints good. During inspection realized the slip yoke had some up and down/lateral play. Replaced the driveshaft with new OEM. Huge improvement, but it’s still there. Drives smooth as butter and quiet, but as soon as you let up on the throttle to coast that growl/vibe hits for a few seconds. Annoying!
I replaced the output bearing in the t-case while I was changing the seal about 60k miles ago. The factory bearing (260k at the time) was pristine so for this one to be bad this quick is a surprise. My hypothesis is that the driveshaft and the lateral play it had along with me driving on that wobbly ass pinion for a year beat up the output bearing in the t-case. I plan to swap it as soon as I can. If you don’t have this sorted out before then I will update with what I find.