Another whirlwind weekend of wrenching done. Drove 300 miles after work on Friday, Saturday morning I started by pulling the Prado into the shop again. The battery was completely dead, so we attempted to let it slowly down off the trailer using a come-along, but the previous night's freezing rain made the trailer deck so slick I couldn't get enough traction to pull the come-along handle. Instead, we let it roll off the ramps slowed by the emergency brake.
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Once inside I started to disconnect all the wires, hoses and pipes from the engine. Within about 4 hours I had a very filthy 1.9TDI hanging in midair.
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First order of business with the engine out was to bolt on my spare bell housing and transmission case to check adapter plate runout. There is not much space inside the bell housing, so I used a mini mag base with a small dial test indicator attached to the flywheel. With this setup I measured about 0.019" of runout, which is more than I had hoped for. The mag base didn't have a very secure connection to the flywheel and one of the arms did not want to lock completely, so there may be some error there. No noticeable wear on the input shaft, input shaft bearing, or clutch assembly though, which is a good sign.
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Next up was replacing the o-ring between the injection pump head and body, which has been leaking for quite a while now. This procedure is generally done in the vehicle, but access is a lot easier in the VW engine bay. Cleanliness is paramount, too, and it was much easier to see that all parts were dirt free with full access. The injection pump remains installed on the engine and the head is loosened and backed off just enough to see the o-ring down in the groove, otherwise little bits come unstuck inside the injection pump and it is time for a full, expensive rebuild.
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I took advantage of the excellent access to replace the alternator; it doesn't get much easier than this:
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I also spent some time going around the engine and engine bay replacing all the worm drive hose clamps with spring clamps. Made an attempt to clean some of the grime off the sides of the engine but didn't get very far, that is something I'll have to tackle next weekend. The turbo oil return line is leaking (again

) so a new gasket for that is on the way. I also managed to track down a multi layer steel gasket that I think is correct for the turbo/manifold joint (which has also started leaking) so I got that on the way from the UK as well.