Alright, fuel injectors came, and she is running WAY better. I metered the old ones and the new ones and they were all 14 ohms, so I'm guessing that #1 was leaking and making a too rich to fire condition.
Yes, the reason we ohm the injectors is to establish that the winding in the injectors solenoid coils are good. Meaning....the solenoid is 'capable' of operating, BUT...that doesn't mean there are no other physical/mechanical issues with an injector. A 'spray' test is the ONLY way to conclusively verify an injector is working properly. I've said time and time again....'Just because it clicks, doesn't mean it is working properly'.
The miss is now gone and the idle is perfect.
So you can likely conclude there was injector problems. You made the right move replacing them.
Only one problem remains – the pulsing idle issue. It will, on a half second interval, jump between 600 RPM down to 200 RPM and stall. It does not do it all the time; when it's not doing it, it idles perfectly. It seems to do it worse from a cold start, and in gear. If I unplug the TPS, it does not seem to do it either but then it idles close to 1000rpm and wont downshift. I adjusted the TPS a little bit which made it idle slightly higher, around 900 RPM, and it is better but it is still definitely there. As soon as I accelerate and it gets up to 1000 RPMs, the issue goes away. Is this symptomatic of a TPS issue? I also readjusted my throttle cables since I installed a new throttle cable, and they are moving freely and not putting any tension on the throttlebody at idle. It's completely drivable now, except that when you start it the idle bounces until you give it a little bit of pedal at which point it will probably idle cleanly, and it may stall all when coming to a complete stop in gear(stop light, etc). Any ideas?
I'd be looking at the TPS and its circuit. Also your Idle Air Control. IMO...this would be the next logical step, although there are other reasons for the symptoms you are experiencing. Be patient and don't become discouraged, you'll get this figured out.