Alright Bro!
Initial upgrades/downgrades (ie: de-smog in Utah)
-timing 9* BTDC (4450 elevation)
-new wires, coil, plugs (Parts store)
-Desmog following the guides on MUD
-Manifold gasket (cruiser outfitters)
*This fixed the huge vacuum leak
-Carb rebuild kit (cruiser outfitters)
Initially it ran better when the #6 plug was pulled. Problem was solved when the manifold gasket was replaced.
Next was the de-smog. Seemed to run well so i took it to get the emissions done. It failed miserably here are the numbers in order. (Utah requires the Air Injection and a CAT for the 1987 fj-60)
*Note i had removed the Air Injection
Below are the tests in the order of testing.
1st test- the timing was set @ 7* BTDC at most maybe even less because of idle
2nd test- Notice it got better in some places and worse in others...
3rd test- was thrown away by the testing center Sorry! but very similar to the 2nd test
4th test- Here is where it gets good! I went to Kurts (cruiser outfitters) picked up some jets. (1.14 for the primary) (1.47 secondary) About 10-20% smaller than original, 3 gallons of gas in the tank on 1/4 gal of denatured alcohol, turned idle up to 900 and BAM! it worked. the testing center did not see the pulley in place of the Pump

. I did not have much power and sputtered a bit, but made it fine. Please do this at your discretion.
Thank you to the MUD members for the help and Kurt.
I hope this helps someone!