This happened to me (over turning bolt) and to my dealer as well. $1300 +There is a lever with sensor in the rear suspension for the 2016+ that is what changes the angle of the headlights. The sensor body is mounted to the frame and the end of the lever is attached to the upper control arm. The sensor uses angular (rotational) movement of the sensor shaft to determine pitch of the truck. The sensor is on the left rear side of the truck.
There is a minor amount of adjustment via a slot on the UCA bracket (~1").
When you lift just the front of the truck, the rear sensor is not affected, therefore making the headlights aim high.
When you install a full suspension lift 2"+, the sensor on the rear suspension in effect recognizes the truck being high in the rear, so it adjusts the headlights up, which double compounds the headlight aim as really high.
In order to trick the sensor to re-level the headlights, you need to either install spacers between the frame bracket and sensor body OR installing a longer end link at the UCA mount.
I started by installing spacers, as it is the easiest remedy. I used some thick washers that I had and installed them in between the frame bracket and the sensor body (roughly 3/16" thick). Then used the UCA bracket slot to give me more adjustment. And finally I fine tuned the aim with the on-headlight screw adjusters.
Just be warned that if you are only adjusting the headlights with the screw adjusters and the headlights are really out of wack, you may adjust too far and disconnect the adjusters. The LED headlights are non-fixable from outside the light (from what I understand) and they are big $$$ to replace.
I can try to take pics of the sensor if anyone is interested.
You can also google search "LC200 headlight sensor spacer" and a AUS company has the spacers for sale (no USA options).