Seems the tech working on it feels the same way about troubleshooting it as I do.
That said, I picked the GX up Friday and have it for a week or so. The shop has had it for two weeks and I needed it back for some things. The tech seemed happy to have a break from it anyhow, I don’t blame him and am happy with the work he’s done on it.
What we’ve learned, thanks to his hard work, is the issue is within the intake manifold. When I picked it up, he mentioned he finally was able to find something else that stopped the symptoms, much like blowing air into the intake. He disconnected the short air line that runs from the PCV valve to the intake manifold and let it sit for the 1-1.5 hours and it didn’t long crank.
This connection:
Based on that, today I did the same and was able to replicate it, with that line unhooked and it sitting for the right amount of time, the long crank problem ceased to happen. I then repeated the process, disconnecting the line and plugged the intake manifold port (leaving the PCV Valve output side to vent) and it exhibited the issue. So the issue isn’t fixed by the PCV system venting, it’s the intake manifold venting to atmosphere that solves the problem. There’s either hot air (likely not the problem) or fuel rich-enough air/EGR recycled air collecting in the intake manifold and that’s leading to the long cranks.
What I’m guessing, based on the setup of the system, is the EGR valve is stuck open. That’s a very suspect direct feed supply that routes into the intake manifold. The only other possibilities are the engines intake valves being open from the cylinders and a few possible vacuum line options that shouldn’t offer anything in the way of possible sources of contamination that’d cause this. He did mention the possibility of fuel in the crankcase and those vapors making their way back up into the intake manifold. I find this possibility as unlikely, but plan to perform a premature oil change to eliminate it as a cause anyhow.
The tech did actually accidentally confirm one theory when he mentioned he could send compressed air backwards through the EGR valve, with the GX off, and hear it exiting the exhaust system. He mentioned he didn’t know if that was normal or an abnormal condition. The EGR valve should be closed when the vehicle is off, and it isn’t. At least that’s what I’m finding online and seemingly in the FSM.
While I have it in my possession, I’m going to clean up the EGR valve and try to dislodge any gum and gunk in there, and retest. The tech did find slightly excessive amounts of gum/guke in the intake manifold and intake runners and cleaned it out nicely. It’s not a stretch to think moving the EGR valve around, during the repairs directly prior to this issue, might have shifted some of that and stuck the EGR valve slightly open thus creating the problem.
I plan to flush the EGR valve clean with some brake cleaner or equivalent (have to see if there’s rubber in there or not) or maybe just replace it ($250) then retest. I hope to have an update within a few days.