I’m not sure that’s the reason, but it is why I abide by the “nominal psi” rule.
FYI Firestone says you have to leave 5psi in it so the bags don’t get pinched between the springs and tear during compression. You’d think it wouldn’t matter because the bag should stay inside the spring, but in my experience the bags stretch a bit after some use and you end up with grooves in them where the spring wraps around as the bag stretches into the coil free space a bit. So I could see an empty bag getting pinched and not slipping back into the inside of the coil.
I don’t know if the internal jounce stop is really necessary to prevent damage during quick compression, or just for comfort. There is an external bump stop which should prevent damage, though a quick full compression without the internal jounce might be teeth jarring. So yeah that’s really why I keep some pressure in mine
I don’t think fully deflating would do much anyway. Having wheeled with the bags installed, I haven’t noticed a big difference in flexibility. If you think about 5psi in a passenger car tire that normally holds 30psi then it sure seems like the bag should compress just fine under the weight of a vehicle