Regarding the top machining, I agree that a billet adapter will be smoother than a fly-cut adapter, but the gasket will seal either way. Regarding the bottom allen head mounting screws, not much we can do about that clearance issue except give allen head mounting screws since their head O.D. is small. We did (past tense) have some mis-machined adapters that we reworked, I was not proud of them, but other than appearance, they did get the job done.
Some adapter features:
(a) Yes we run the throttle body at 90 degrees (longitudinal) since we had clearance issues otherwise!!
(b) The 90 degree twist gives us a taller adapter, which gives us a larger open throat plenum chamber, which gives us higher performance than a shorter adapter.
(c) The laser cut base plate acts as a block-off plate AND throttle linkage (cable) mount. The casting that eliminates the laser cut cost twice as much as the laser cut. Our design choice was merely based on simplicity and cost.