Hi
Obviousl a bit of confusion here on what was checked. I recommend to reset to square one.
@Touz :
First identify the source of the whine: Gearbox or diff. Have a passenger crawl around in the car when driving and help identify where it comes from.
Also carefully observe changes when accelerating or being in push.
Go from there.
Obvious: Check oil in gearbox and tranny, if not yet done.
How many km since last (assumed) change?
Do you have plugs with magnets? (If not: Time to get those).
On good gearbox and tranny, the oil should be clear after 20000+km (I changed mine last Friday and found it that way).
Check for debris. If necessary: Filter the oil to check for debris. Whine equals tear, which at minimum produces some glitter.
Notes on different filling levels between gearbox and tranny due to the seal issue have been made already.
On a rear diff you might experience:
Brown color, but oil is clear: In particular noticed on LSD diffs: The LSD friction pads burn the oil a bit. That's normal. Note LSD diff needs special oil / additive.
Graphite black, cloudy or even intransparent oil: MoS2 greas from the wheel bearings made it into the oil. (applies to front and rear diff). The oilseals on the axle are not happy, but not necessarily shot. This also may happen as a result of clogged axle breathers: Not only may oil seap trough the seal into the bearing when expanding, but also grease or grease-oil-mixture can be sucked in when the axle cools. I had that on my front axle. After declogging the breather the seals had another 10000km life.
Also note: The drain plug is not straight at the bottom of the diff. Some residue oil remains in the diff T its bottom, and also other residues may accumulate there. Also grease sticks to the sidewalls. If the axle ever had an issue with grease in oil, you will see some clouds in the oil for a long time, unless you remove the diff cover and flush the housing (which is rarely done and also mostly unnecessary).
'Cappucino' foamy condition, which indicates water in the oil. Either trough the breather our trough really shot seals. (applies to front and rear diff)
Concerning overfill of any oil reservoir:
This usually happens when oil is filled while the rig is on the hoist:
Modern 4 arm hoists reach to the frame, mostly also using some sort of extension.
The frame isn't straight, causing the vehicle to lean to the front. Not being level causes overfill.
Check with who did the last change on what might have happened in this regard.
Good Luck Ralf