There is a lot of confusion on these breathers, here and on the FB group. So I went looking for the final answer.
According to the parts diagrams, there are a total of 4 breathers (5 depending on how you count.)
1. Rear Diff - on rear diff, no hose from factory
2. Front Diff - on front diff, hose routes to driver side engine bay, visible from above
3. Transmission - Hose runs along the top of the transmission to the bell housing
4*. Transfer Case - Hose also runs forward towards top of transmission
5** Transfer Case Actuator - Runs to #4
*You can see in the diagrams, #4 mounts with a Y-fitting, to accept the breather from the T-Case actuator
**You can see in the next picture, the actuator hose is short and only runs to the Transfer case breather Y-fitting
Rear Diff: Rear axle housing & differential for Lexus GX470 UZJ120L - Auto parts
Front Diff: Front axle housing & differential for Lexus GX470 UZJ120L - Auto parts
Transmission: Transmission case & oil pan (atm) for Lexus GX470 UZJ120L - Genuine parts
Transfer Case: Transfer case & extension housing for Lexus GX470 UZJ120L - Auto parts
NOTE: According to some parts catalogs, These breather sub-assembly PN #36407 were changed in August 2004, but the diagrams all remain the same, so YMMV:
Transfer Case Actuator: Transfer lever & shift rod for Lexus GX470 UZJ120L - Genuine parts
According to the parts diagrams, there are a total of 4 breathers (5 depending on how you count.)
1. Rear Diff - on rear diff, no hose from factory
2. Front Diff - on front diff, hose routes to driver side engine bay, visible from above
3. Transmission - Hose runs along the top of the transmission to the bell housing
4*. Transfer Case - Hose also runs forward towards top of transmission
5** Transfer Case Actuator - Runs to #4
*You can see in the diagrams, #4 mounts with a Y-fitting, to accept the breather from the T-Case actuator
**You can see in the next picture, the actuator hose is short and only runs to the Transfer case breather Y-fitting
Rear Diff: Rear axle housing & differential for Lexus GX470 UZJ120L - Auto parts
Front Diff: Front axle housing & differential for Lexus GX470 UZJ120L - Auto parts
Transmission: Transmission case & oil pan (atm) for Lexus GX470 UZJ120L - Genuine parts
Transfer Case: Transfer case & extension housing for Lexus GX470 UZJ120L - Auto parts
NOTE: According to some parts catalogs, These breather sub-assembly PN #36407 were changed in August 2004, but the diagrams all remain the same, so YMMV:
Transfer Case Actuator: Transfer lever & shift rod for Lexus GX470 UZJ120L - Genuine parts