What I've done the past is remove your hood and suspend your turbo in the engine bay exactly as yould like it to be. I use an overhead hoist, but a 2x4 or anything like it as long as it's stable and gives you a bit of room to weld. You can then attach the t3 flange and the td05 flange and it will give you an exact idea of the dimentions for the adaptor. I then use some bent rod welded to each flange so as to keep the spacing exactly as I want it, but so the the stabilizing rods allow me enough space to begin welding sections of steel in between the flanges creating the exhaust runners. After a substantial amount of runner is in place to maintain the alignment, I cut off the stabilizing rods to make extra room. Hard to explain without pics sorry, but it will save you a lot of trial and error vs doing a mock up paper one, and let's you being building the keeper. I build all of my manifolds this way on a dead engine on a stand and have offsets for alternators and firewall and all of the objects I use to create a "box" to build in so to speak. The final results are always predictable unless you get some warpage. I usually tac all my builds together and then heat it all uniformly in my BBQ and weld it completely. I don't usually get much warpage at all this way. Welding it cold had caused me a lot of grief as I often had to cut and rewelded some sections to relieve stress. Hope that helps.
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Sorry, forgot to mention that once you tac the bent stabilizing rods onto the flanges you remove it from the engine bay the begin building the runners. Wouldn't be easy to build it in the bay. If the rods are welded well enough, they should maintain the proper orientation.