Mine is a 15BFT - no throttle/butterfly on it. Intake is smaller than the bulky 15BF one and only has the glow screen in it with a smaller ~2" inlet. The accelerator linkage and the shutoff both act directly on the inline IP on my 15BFT.
I have 3B's, which have a throttle/butterfly in the intake, but they use it for controlling the injection pump (drive by cow - there's a leather diaphragm on the injection pump with a tube either side of the intake butterfly). As far as I'm aware the 15BF with a rotary pump is controlled at the IP and people have removed the butterfly from the intake when fitting turbo setups etc.
I've not really looked into it on the 15BF, but I think there may be other Toyota turbo diesels with them, eg 12HT (have heard people call those a shutdown butterfly, but I'm not aware if that's used in conjunction with a shutdown feature at the IP). Perhaps on the 15BF it has something to do with tuning/emissions and/or to smooth on shutdown. Re tuning, a throttle can adjust the air/fuel ratio at low load/RPM, can be used to aid control of EGR equipment on later versions eg 15BFTE, or simply to introduce turbulence.
Apologies for a long post of rambling with no clear answer, I'm just another hobbyist not a diesel professional