What is your current setup exactly?
I've got hydroboost in my rig. The hydroboost unit replaces only the vacuum booster. You still use a regular hydraulic brake master cylinder, with or without a proportioning valve as you prefer.
I never ran the 4Runner calipers with hydroboost, but I did run the stock FJ60 front calipers with FZJ80 rear calipers and she stopped well with 37s. No comparison to how she stops now, but it was good.