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Oh and never bench test a pump right after you pull it out of the tank. A fire and cool shenanigans will ensue.
One more issue that has surfaced: my alternator is only putting out 13-ish volts. I never have trouble starting, even with the fridge running overnight.
I didn't know it was low until @TrickyT pointed out that I should be seeing at least 14v.
Cam,
For the record, can you post up weight difference of the 2F+H55 combo versus the Vortec+auto combo. It's not obvious to me that the later is significantly heavier, although having your front springs sag should be proof enough of that. Just would like to see some quantitative info to back it up.
And, knowing nothing about these kinds of swaps, the fuel pump you installed during the swap must have a return line that bleeds off excess fuel back to the tank, right? Just like on FJ62's?
Cam is getting groupies. Bravo!
One more issue that has surfaced: my alternator is only putting out 13-ish volts. I never have trouble starting, even with the fridge running overnight.
This is weird because my truck has always shown 13v with the 2F, with two different alternators and voltage regulators and now again with the GM setup.
I'm reading it off the factory gauge, scanguage, and with a multimeter.
I didn't know it was low until @TrickyT pointed out that I should be seeing at least 14v.
You should actually see more like 14.5 - 14.8. That will lead to quick recharging of your batteries. 13.0 is more like a float voltage after the real charging is done. We didn't really get to this, but it's still an issue.
Your road trip sounds pretty epic - is there a thread?
Did you determine why the trans/gear box leak happened? Seal between the two fail?
.I did some internet sleuthing, and it sounds like my alternator should be controlled by the ECM, by way of the BCM (body control module).It sounds like mine is running on the "default" voltage, which is the 100% duty cycle output of 13.8V. I'm seeing fluctuations (via the scanguage) of 12.8V - 13.5V which, I'm guessing, include some losses from the 13.8V.
One solution I found was to switch to the earlier 4-wire alternator and add the appropriate wires to get the internal voltage regulator to actually regulate. The other was to live with it.

BTW, when I got home i told JFZ80 about your leaking fluid issue and he said that was common with that swap, so i'm assuming there is a good fix for the issue.
Seems to me the only way fluid could get through is around the splines of the output shaft. The rest of the auto is sealed, right?
I think this is spot on. Earlier, when you said your alternator was only putting out 13V, I assume this was based on measurements at the battery or further 'downstream' where the scanguage is connected. If so, the alternator is probably putting out the standard ~14V and the delta you're seeing is simply due to voltage drop in the system. I'm not familiar with the newer model alternator you're using or the wiring harness modifications that have been made, but I'd guess, with the elimination of the BCM, the alternator now has the remote sensing input disabled/disconnected...effectively removing the regulating abilities of the internal regulator. Ideally, this remote sensing input would be connected to the electrical system downstream from the battery. When 13V is sensed there (like your scanguage is registering), the internal regulator will allow the alternator to boost the output to say 15V until the ~14V is sensed in the system.