That diagram you made is outstanding....i wish it was available when i did mine 10 yrs ago.Hi mate, attached I am providing a modified Desmogged vacuum hose information. Its based on the Toyota one, but its color coded for easier line following and I have marked the capped ones with cap icons.
I have spent much time reading thought many desmogged threads here in the forum, inspected countless photos and even bought a spare manifold so that I follow the vacuum lines and correctly decide which must be capped. I hope that it helps you.
Disclaimer: The diagram has not been peer reviewed yet by experienced 3FE forum members such as @jonheld so if there are errors, I will fix them and update it right away so that it can be used as future reference.
FWIW, the VSV for the fuel pressure isn't necessary and most likely not your issue. (I have had mine disconnected for the past 8 yrs and had no affect on my engine performance) It might contribute to occasional hard start when engine is warm. WIth that said, i still think you have a major vacuum leak. ( PCV) etc.
The only source of vacuum leak i can see from Desmog potentially would be the vacuum port at the intake manifold check valve (the black round check valve with 2 nipples, the 2 vacuum port at the top of the intake manifold. Those are the only source of potential vacuum leak for the intake manifold.