I’ve been chasing down an engine noise and it led me to taking off the valve cover. After putting everything back on I have had a rough idle and a misfire on cylinder 2, most likely caused by me pulling on the spark plug boot too hard. I replaced the wire the misfire code hasn’t come back but the rough idle still persists. It is most evident when I put it in gear, like a low rumble with a lot of engine movement. I have triple checked the vacuum lines and I’m at a loss. Any ideas?