The Yanmar 6LP series is actually the 1HDFT, not the 1HDT. That is important, as things like intake manifold, linkage, exhaust manifold...are very different (I did what you did and have that engine in my 80). So are the injector lines and pump settings-these are important, as the Yanmar equilibrated pump puts out a lot more fuel than the truck cooling system can handle.
Most of the stuff is still available, some is not (like the throttle linkage plate on the intake manifold). Beno is fantastic, but a lot of the things you will have to get from overseas. Akella and amayama will be your friends.
You'll also have to change the water jacket, as the angle is very different on the sea-water cooled engine as opposed to the truck engine.
About the bearings-toyota used lots of bearings for tiny differences. Chances are you won't find those. However, the tolerances are big enough that the aftermarket that come in 005 and 01 over will do just fine. The rebuild or gasket kit from engine australia for the 1hdft will have everything you need.
Note that the piston-top shape is also very different between Myanmar 6lp and 1hdft, likely to handle the increased fuel. I would not mess with that, if you are not dewing a full rebuild, but you will not be able to swap out a single piston.
Have fun with it, it is a great engine.